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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924014.1_cds_XP_016472482.1_64712
CDS Infomation

[gene=LOC107794498] [db_xref=GeneID:107794498] [protein=DSC E3 ubiquitin ligase complex subunit 1-like isoform X3] [protein_id=XP_016472482.1] [location=join(24405..24530,27073..27148,27449..27576,28224..28333,28971..29028,29602..29668,29749..29826,29933..30090,30177..30236,30345..30438,30770..30937,31874..32202,32423..32539,32641..32790)] [gbkey=CDS]
Sequence

ATGGGTGCCACAAAAAAATTGATCTTTTTAAGAATTCTGTTCTATTTATGGTTCTTCTTT
GGAGGGTTTTGCTCAGTAAAGGGACTCAGGCCTCTTAGAGAAAGGTCTCGTTCGTGGAGT
GATGAGCAGTGGCTATTTGCAAAGAAGGATGACAATGAATTGGGGCCATTTTCTGCTTGG
AATATAACAGGAACATACAGAGGATCTTGGAGGTTCCTAGATTCAACGAATAGCTCTTCT
CGTTTTCCTGATTTTCAGAAGTCCAATGGAAACTCTGTCCTGGAATTGATTAGTGCTCCA
ACAAAAATAACTGGTGTACATTATGTTCAGGGTGTAATAATTTTCCATGATGTTTTTGAC
AATGAACATGGGGGTGCTCAAATTAGAGTAGAAGGTGTATATGTATGGCCATTCAGACAA
CTTCGGATGGTAGCTTACAGCAAAGAGGGTGAGCTTGGGCAGGAAGACGATTATCTGTTA
TCAAATCCATATCATTTGCTTGGACTTTTCTCATCTCAGGTCTTCCAGGAGTCTCCACGA
GATAAGATTTGGAAAAGGAAACATTCACCTATTTATGAAATGGAGAAACATTGTAATGTT
GAAATTGCAGCACAAGTTTCTCGTGTCACATCTTCCACTACTGATGTAGATCGTGATCAT
TATCATCTAGAAGGATTGATGGAAAGCCCTTCAGTGGATGACGATGGAAACTGTTTCTCA
CCCATGCTATTAAATGCTACTTCTGTCAATATAGAGGTTTACTACAACAAAGCAGTTAAC
TATACGTTGATGGTCACCTTTGTATCTTTTCTTCAAGTGCTCCTTCTCATTCGGCAAATG
GAATATAGCAACACCCAATCAGGAGCTTCCAAAGTTTCAATTCTGATGATCGGACAACAG
GGAATAATTGATTCTTATCTTTGTCTTCTGCATCTGACTGCAGGCATACTTGTTGAATCC
CTGTTCAATGCTTTTGCAACTGCTGCATTTTTCAAGTTTGTTGTGTTCTCAATATTTGAG
ATGAGATATCTTCTCGCTATATGGAAGGCAAATAGACCTATGAATAGTGGAGAGGGTTGG
GAAGCAATGAGGCGTGAGCTATCAGTTCTATACAGCCGTTTCTATGGGATCCTTTTAGGT
GGCATTTTGGTCATGTACGAGTTCCATAAGTTTCTGCGGCCTCTTCTTCTCCTTTTACAC
TCTTTTTGGATACCTCAAGTTGTAACTAATGTTATTCGTGACTCGAGAAAACCATTGCAT
CCTCATTACATCTTGGGAATGACTATAACTCGGTTAGCAATCCCACTATATGTCTTTGGT
TGTCCTCACAATTTTATGCGGATAGAGCCCGACGAAAATTGGTGCATCTGCTTGGGAATT
TTCATGGCATTCCAAGCATCAGTTCTTCTTTTGCAGCACTATCTTGGATCTCGGTGGTTC
ATTCCTCGTCAGATTTTACCGGAGAAGTATAGCTATTATAGAAGGTTTAACCAGGATGCA
GCTCGTGTCTCTGACTGTGTCATTTGCATGACTGCTATTGATCTTACTCAACGTGCAAAT
CATTGGATGGTGACGCCTTGTGATCATTTCTTTCATTCCGGTTGTTTACAAAGATGGATG
GACATAAAGATGGAGTGCCCAACATGCCGACGTCCTCTTCCTCCCGCCTGNTGCCTGAAT
AGATTTATTTTTGAATTCCTATTGATTTGGAACAACTGA

Peptide Sequence

PEP ID

XP_016472482.1
PEP Infomation

PREDICTED: DSC E3 ubiquitin ligase complex subunit 1-like isoform X3 [Nicotiana tabacum]
Sequence

MGATKKLIFLRILFYLWFFFGGFCSVKGLRPLRERSRSWSDEQWLFAKKDDNELGPFSAW
NITGTYRGSWRFLDSTNSSSRFPDFQKSNGNSVLELISAPTKITGVHYVQGVIIFHDVFD
NEHGGAQIRVEGVYVWPFRQLRMVAYSKEGELGQEDDYLLSNPYHLLGLFSSQVFQESPR
DKIWKRKHSPIYEMEKHCNVEIAAQVSRVTSSTTDVDRDHYHLEGLMESPSVDDDGNCFS
PMLLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEYSNTQSGASKVSILMIGQQ
GIIDSYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPMNSGEGW
EAMRRELSVLYSRFYGILLGGILVMYEFHKFLRPLLLLLHSFWIPQVVTNVIRDSRKPLH
PHYILGMTITRLAIPLYVFGCPHNFMRIEPDENWCICLGIFMAFQASVLLLQHYLGSRWF
IPRQILPEKYSYYRRFNQDAARVSDCVICMTAIDLTQRANHWMVTPCDHFFHSGCLQRWM
DIKMECPTCRRPLPPAXCLNRFIFEFLLIWNN

Transcript Sequence

Gene sequence data has not been registered.